STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGEF-2Ephexin-1. (424 aa)    
Predicted Functional Partners:
NGEF
Ephexin-1.
 
     0.897
vab-1
Ephrin receptor 1.
    
 0.713
vab-1-2
Ephrin receptor 1.
    
 0.713
vab-1-3
Ephrin receptor 1.
    
 0.713
ARHGEF12
Rho guanine nucleotide exchange factor 12.
    
 0.686
ephb1-b
Ephrin type-B receptor 1-B.
    
 0.686
rho-1
Ras-like GTP-binding protein rhoA.
    
 0.658
rho-1-2
Ras-like GTP-binding protein rhoA.
    
 0.658
rho-1-3
Ras-like GTP-binding protein rhoA.
    
 0.658
Rho1
Ras-like GTP-binding protein Rho1.
    
 0.658
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.