STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIT4BBifunctional nitrilase/nitrile hydratase NIT4B. (647 aa)    
Predicted Functional Partners:
Srm
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
  
 
 0.887
gei-7
Bifunctional glyoxylate cycle protein.
  
 
 0.887
aldh4a1
Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.860
alh-9
Putative aldehyde dehydrogenase family 7 member A1-like protein; Belongs to the aldehyde dehydrogenase family.
  
 0.860
GAD1
Glutamate decarboxylase 1.
  
 
 0.836
lipt2
Putative lipoyltransferase 2, mitochondrial.
    
 0.833
Tcan_16461
Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
  
 
 0.831
ALDH3A2
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.827
Aldh5a1
Succinate-semialdehyde dehydrogenase, mitochondrial; Belongs to the aldehyde dehydrogenase family.
  
 0.827
ALDH3A2-2
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.827
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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