STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcan_12028Uncharacterized protein. (107 aa)    
Predicted Functional Partners:
hel-1
Spliceosome RNA helicase DDX39B-like protein.
   
 0.986
alyref-b
THO complex subunit 4-B.
   
 0.949
Thoc1
THO complex subunit 1.
    
 0.920
thoc7
THO complex subunit 7-like protein.
   
 0.903
thoc5
THO complex subunit 5-like protein.
    
 0.867
Tcan_02401
Uncharacterized protein.
   
 0.839
THOC2
THO complex subunit 2.
   
 0.839
uaf-1
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.823
THOC3
THO complex subunit 3.
     
 0.821
mag-1
Protein mago nashi-like protein.
   
 0.821
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.