STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R102.4Beta_elim_lyase domain-containing protein. (363 aa)    
Predicted Functional Partners:
mel-32
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
   
 0.943
Gldc
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
    
 0.940
tdcB
L-threonine dehydratase catabolic TdcB.
  
 
 0.926
AGXT
Serine--pyruvate aminotransferase.
    
 0.919
AGXT-2
Serine--pyruvate aminotransferase, mitochondrial.
    
 0.919
DLD
Dihydrolipoyl dehydrogenase, mitochondrial.
    
 0.909
PSPH
Phosphoserine phosphatase.
    
 0.907
AMT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
   
 0.902
Tcan_01903
Putative hydroxyacid-oxoacid transhydrogenase, mitochondrial.
    
 0.894
srr
Putative serine racemase.
  
 
 0.892
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.