STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcan_17523SP-RING-type domain-containing protein. (179 aa)    
Predicted Functional Partners:
SMC6
Structural maintenance of chromosomes protein 6.
    
 0.999
Tcan_05706
Uncharacterized protein.
    
 0.999
NDNL2
Melanoma-associated antigen G1.
    
 0.998
SMC5
Structural maintenance of chromosomes protein 5.
    
 0.991
smc5
Structural maintenance of chromosomes protein 5.
    
 0.991
Smc5
Structural maintenance of chromosomes protein 5.
    
 0.980
ubc-9
SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.934
ubc-9-2
SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.934
F52C9.5-5
Uncharacterized protein F52C9.5.
   
 0.918
smo-1
Small ubiquitin-related modifier.
   
 0.897
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.