STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl-16-260S ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family. (203 aa)    
Predicted Functional Partners:
RPL3
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 0.999
rpl-6
60S ribosomal protein L6.
  
 0.999
rpl-7
60S ribosomal protein L7.
  
 0.999
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
rpl-5
60S ribosomal protein L5.
  
 0.999
Rpl23a
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 0.999
rpl-9
60S ribosomal protein L9.
  
 0.998
RpL36
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
 0.998
rps-14
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
  
 0.998
rpl-11.1
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
  
 0.998
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.