STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fib-1rRNA 2'-O-methyltransferase fibrillarin. (296 aa)    
Predicted Functional Partners:
NOP58
Nucleolar protein 58.
   
 0.999
TBL3
Transducin beta-like protein 3.
   
 
 0.999
WDR75
WD repeat-containing protein 75.
   
 0.999
Rrp9
U3 small nucleolar RNA-interacting protein 2.
   
 0.999
byn-1
Cell adhesion protein byn-1.
   
 
 0.999
K07C5.4
Putative NOP5 family protein K07C5.4.
   
 0.999
K01G5.5
Putative H/ACA ribonucleoprotein complex subunit 4.
   
 
 0.999
WDR36
WD repeat-containing protein 36.
   
 
 0.999
Wdr43
WD repeat-containing protein 43.
   
 0.999
ZC434.4
Ribosomal RNA-processing protein 7-like protein.
   
 0.999
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.