Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C35C5.3 | Eefsec | A0A0B2UNZ7 | A0A0B2UNT6 | Putative selT-like protein C35C5.3. | Selenocysteine-specific elongation factor. | 0.615 |
C35C5.3 | SEP15 | A0A0B2UNZ7 | A0A0B2V716 | Putative selT-like protein C35C5.3. | 15 kDa selenoprotein. | 0.647 |
C35C5.3 | YIPF5 | A0A0B2UNZ7 | A0A0B2VBJ9 | Putative selT-like protein C35C5.3. | Protein YIPF. | 0.451 |
C35C5.3 | YIPF5-2 | A0A0B2UNZ7 | A0A0B2VHE7 | Putative selT-like protein C35C5.3. | Protein YIPF5. | 0.451 |
C35C5.3 | gpx-3 | A0A0B2UNZ7 | A0A0B2UJN8 | Putative selT-like protein C35C5.3. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.560 |
C35C5.3 | msrB | A0A0B2UNZ7 | A0A0B2V7J7 | Putative selT-like protein C35C5.3. | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | 0.451 |
C35C5.3 | secs-1 | A0A0B2UNZ7 | A0A0B2VNM1 | Putative selT-like protein C35C5.3. | O-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis. | 0.416 |
C35C5.3 | seld-1 | A0A0B2UNZ7 | A0A0B2UR46 | Putative selT-like protein C35C5.3. | Putative selenide, water dikinase. | 0.607 |
Eefsec | C35C5.3 | A0A0B2UNT6 | A0A0B2UNZ7 | Selenocysteine-specific elongation factor. | Putative selT-like protein C35C5.3. | 0.615 |
Eefsec | SEP15 | A0A0B2UNT6 | A0A0B2V716 | Selenocysteine-specific elongation factor. | 15 kDa selenoprotein. | 0.594 |
Eefsec | secs-1 | A0A0B2UNT6 | A0A0B2VNM1 | Selenocysteine-specific elongation factor. | O-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis. | 0.608 |
Eefsec | seld-1 | A0A0B2UNT6 | A0A0B2UR46 | Selenocysteine-specific elongation factor. | Putative selenide, water dikinase. | 0.680 |
SEP15 | C35C5.3 | A0A0B2V716 | A0A0B2UNZ7 | 15 kDa selenoprotein. | Putative selT-like protein C35C5.3. | 0.647 |
SEP15 | Eefsec | A0A0B2V716 | A0A0B2UNT6 | 15 kDa selenoprotein. | Selenocysteine-specific elongation factor. | 0.594 |
SEP15 | Uggt1 | A0A0B2V716 | A0A0B2V1L1 | 15 kDa selenoprotein. | UDP-glucose:glycoprotein glucosyltransferase 1. | 0.735 |
SEP15 | YIPF5 | A0A0B2V716 | A0A0B2VBJ9 | 15 kDa selenoprotein. | Protein YIPF. | 0.462 |
SEP15 | YIPF5-2 | A0A0B2V716 | A0A0B2VHE7 | 15 kDa selenoprotein. | Protein YIPF5. | 0.462 |
SEP15 | gpx-3 | A0A0B2V716 | A0A0B2UJN8 | 15 kDa selenoprotein. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.555 |
SEP15 | msrB | A0A0B2V716 | A0A0B2V7J7 | 15 kDa selenoprotein. | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | 0.449 |
SEP15 | nas-12 | A0A0B2V716 | A0A0B2VJP0 | 15 kDa selenoprotein. | Metalloendopeptidase. | 0.593 |
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