STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcan_04834Bromo domain-containing protein. (455 aa)    
Predicted Functional Partners:
Taf7
Transcription initiation factor TFIID subunit 7.
    
 
 0.865
Taf7-2
Transcription initiation factor TFIID subunit 7.
    
 
 0.865
DMAP1
DNA methyltransferase 1-associated protein 1.
    
 
 0.813
TAF1
Transcription initiation factor TFIID subunit 1.
    
 
 0.755
psr-1
Bifunctional arginine demethylase and lysyl-hydroxylase psr-1.
    
 
 0.745
cdk-9
Putative cyclin-dependent kinase 9; Belongs to the protein kinase superfamily.
   
 
 0.744
htz-1
Histone H2A; Belongs to the histone H2A family.
    
 
 0.739
cbp-1
Protein cbp-1.
   
 0.688
cbp-1-2
Protein cbp-1.
   
 0.688
YEATS4
YEATS domain-containing protein 4.
    
 
 0.683
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.