STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pme-5-2Poly(ADP-ribose) polymerase pme-5. (1680 aa)    
Predicted Functional Partners:
PARG
Poly(ADP-ribose) glycohydrolase.
    
 0.862
ced-3
Cell death protein 3; Belongs to the peptidase C14A family.
    
 0.816
Chd1l
Chromodomain-helicase-DNA-binding protein 1-like.
   
 0.773
Tcan_05819
Caltractin.
    
 0.746
gei-17
E3 SUMO-protein ligase gei-17.
    
 0.743
crn-1
Flap endonuclease 1.
   
 0.741
FEN1
Flap endonuclease 1.
   
 0.741
Rpa2
Replication protein A 32 kDa subunit.
   
 0.721
Tcan_07995
Uncharacterized protein.
   
 0.721
Tcan_02064
BHD_1 domain-containing protein.
    
 0.717
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.