STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F55A12.8RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1126 aa)    
Predicted Functional Partners:
bms1
Ribosome biogenesis protein bms1.
   
 
 0.995
WDR36
WD repeat-containing protein 36.
   
 
 0.994
F55F8.3
Periodic tryptophan protein 2-like protein.
   
 
 0.994
UTP20
Small subunit processome component 20-like protein.
   
 
 0.994
TBL3
Transducin beta-like protein 3.
   
 
 0.993
K07C5.4
Putative NOP5 family protein K07C5.4.
   
 
 0.993
nol6
Nucleolar protein 6.
   
 
 0.993
PDCD11
Protein RRP5-like protein.
   
 
 0.993
NOP58
Nucleolar protein 58.
   
 
 0.992
nol10
Nucleolar protein 10.
   
 
 0.992
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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