STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arl-1ADP-ribosylation factor-like protein 1. (144 aa)    
Predicted Functional Partners:
F54C8.7
Uncharacterized protein F54C8.7.
    
 0.949
Shank3
SH3 and multiple ankyrin repeat domains protein 3.
   
 0.878
unc-89-3
Muscle M-line assembly protein unc-89.
   
 0.873
unc-89-4
Muscle M-line assembly protein unc-89.
   
 0.873
unc-89-5
Muscle M-line assembly protein unc-89.
   
 0.873
Rab6a
Ras-related protein Rab-6A.
   
 0.849
RAB6A
Ras-related protein Rab-6A.
   
 0.849
YPT6
GTP-binding protein YPT6.
   
 0.840
Cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.837
STX16
Syntaxin-16; Belongs to the syntaxin family.
    
 0.829
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.