STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vps13cVacuolar protein sorting-associated protein 13C. (731 aa)    
Predicted Functional Partners:
Vps13c-2
Vacuolar protein sorting-associated protein 13C.
 
     0.930
Vps13c-4
Vacuolar protein sorting-associated protein 13C.
 
      0.899
Gak
Cyclin-G-associated kinase.
    
 
 0.672
VPS35
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.559
Synj1
Synaptojanin-1.
    
 
 0.522
ybx2-a
Y-box-binding protein 2-A.
    
 
 0.445
Tcan_06118
Y-box factor-like protein.
    
 
 0.445
ybx2-b
Y-box-binding protein 2-B.
    
 
 0.445
lin-28
Protein lin-28.
    
 
 0.445
Tcan_15242
Y-box factor-like protein.
    
 
 0.445
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.