STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mks1Meckel syndrome type 1-like protein. (513 aa)    
Predicted Functional Partners:
B9d1
B9 domain-containing protein 1.
    
 0.931
b9d2
B9 domain-containing protein 2.
    
0.927
Cc2d2a
Coiled-coil and C2 domain-containing protein 2A.
    
 0.873
Cc2d2a-2
Coiled-coil and C2 domain-containing protein 2A.
    
 0.873
tmem216
Transmembrane protein.
     
 0.871
CC2D2A
Coiled-coil and C2 domain-containing protein 2A.
    
 0.861
TMEM67
Meckelin.
     
 0.834
TMEM67-3
Meckelin.
     
 0.834
TMEM67-2
Meckelin.
     
 0.800
R08D7.4
Uncharacterized protein R08D7.4; Belongs to the complex I LYR family.
    
 0.792
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.