Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDX23 | unc-7-3 | A0A0B2W157 | A0A0B2VCH1 | Putative ATP-dependent RNA helicase DDX23; Belongs to the DEAD box helicase family. | Innexin; Structural component of the gap junctions. Belongs to the pannexin family. | 0.484 |
GluClalpha-3 | unc-7-3 | A0A0B2VFD7 | A0A0B2VCH1 | Glutamate-gated chloride channel; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | Innexin; Structural component of the gap junctions. Belongs to the pannexin family. | 0.611 |
RAB7A | nsf-1 | A0A0B2UVL4 | A0A0B2VYN1 | Ras-related protein Rab-7a. | Vesicle-fusing ATPase. | 0.794 |
RAB7A | nsf-1-2 | A0A0B2UVL4 | A0A0B2W3U0 | Ras-related protein Rab-7a. | Vesicle-fusing ATPase. | 0.794 |
RAB7A | unc-7-3 | A0A0B2UVL4 | A0A0B2VCH1 | Ras-related protein Rab-7a. | Innexin; Structural component of the gap junctions. Belongs to the pannexin family. | 0.474 |
Tcan_02771 | unc-7-3 | A0A0B2VQI0 | A0A0B2VCH1 | Uncharacterized protein. | Innexin; Structural component of the gap junctions. Belongs to the pannexin family. | 0.475 |
Tcan_05976 | unc-7-3 | A0A0B2VCW3 | A0A0B2VCH1 | Uncharacterized protein. | Innexin; Structural component of the gap junctions. Belongs to the pannexin family. | 0.508 |
Tcan_10025 | unc-7-3 | A0A0B2VW92 | A0A0B2VCH1 | Uncharacterized protein. | Innexin; Structural component of the gap junctions. Belongs to the pannexin family. | 0.511 |
Tcan_10384 | unc-7-3 | A0A0B2VS32 | A0A0B2VCH1 | G_PROTEIN_RECEP_F1_2 domain-containing protein. | Innexin; Structural component of the gap junctions. Belongs to the pannexin family. | 0.476 |
Tcan_12690 | unc-7-3 | A0A0B2V0K6 | A0A0B2VCH1 | G_PROTEIN_RECEP_F1_2 domain-containing protein. | Innexin; Structural component of the gap junctions. Belongs to the pannexin family. | 0.458 |
nsf-1 | RAB7A | A0A0B2VYN1 | A0A0B2UVL4 | Vesicle-fusing ATPase. | Ras-related protein Rab-7a. | 0.794 |
nsf-1 | unc-7-3 | A0A0B2VYN1 | A0A0B2VCH1 | Vesicle-fusing ATPase. | Innexin; Structural component of the gap junctions. Belongs to the pannexin family. | 0.456 |
nsf-1-2 | RAB7A | A0A0B2W3U0 | A0A0B2UVL4 | Vesicle-fusing ATPase. | Ras-related protein Rab-7a. | 0.794 |
nsf-1-2 | unc-7-3 | A0A0B2W3U0 | A0A0B2VCH1 | Vesicle-fusing ATPase. | Innexin; Structural component of the gap junctions. Belongs to the pannexin family. | 0.456 |
unc-7-3 | DDX23 | A0A0B2VCH1 | A0A0B2W157 | Innexin; Structural component of the gap junctions. Belongs to the pannexin family. | Putative ATP-dependent RNA helicase DDX23; Belongs to the DEAD box helicase family. | 0.484 |
unc-7-3 | GluClalpha-3 | A0A0B2VCH1 | A0A0B2VFD7 | Innexin; Structural component of the gap junctions. Belongs to the pannexin family. | Glutamate-gated chloride channel; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 0.611 |
unc-7-3 | RAB7A | A0A0B2VCH1 | A0A0B2UVL4 | Innexin; Structural component of the gap junctions. Belongs to the pannexin family. | Ras-related protein Rab-7a. | 0.474 |
unc-7-3 | Tcan_02771 | A0A0B2VCH1 | A0A0B2VQI0 | Innexin; Structural component of the gap junctions. Belongs to the pannexin family. | Uncharacterized protein. | 0.475 |
unc-7-3 | Tcan_05976 | A0A0B2VCH1 | A0A0B2VCW3 | Innexin; Structural component of the gap junctions. Belongs to the pannexin family. | Uncharacterized protein. | 0.508 |
unc-7-3 | Tcan_10025 | A0A0B2VCH1 | A0A0B2VW92 | Innexin; Structural component of the gap junctions. Belongs to the pannexin family. | Uncharacterized protein. | 0.511 |
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