Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lysmd3 | Tcan_05977 | A0A0B2VDY5 | A0A0B2VIU7 | LysM and putative peptidoglycan-binding domain-containing protein 3. | Uncharacterized protein. | 0.446 |
Lysmd3 | Tcan_09392 | A0A0B2VDY5 | A0A0B2USR8 | LysM and putative peptidoglycan-binding domain-containing protein 3. | Uncharacterized protein. | 0.594 |
Lysmd3 | ZK632.7 | A0A0B2VDY5 | A0A0B2VNA6 | LysM and putative peptidoglycan-binding domain-containing protein 3. | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] | 0.451 |
Lysmd3 | lysmd1 | A0A0B2VDY5 | A0A0B2V194 | LysM and putative peptidoglycan-binding domain-containing protein 3. | LysM and putative peptidoglycan-binding domain-containing protein 1. | 0.596 |
Tcan_05977 | Lysmd3 | A0A0B2VIU7 | A0A0B2VDY5 | Uncharacterized protein. | LysM and putative peptidoglycan-binding domain-containing protein 3. | 0.446 |
Tcan_09392 | Lysmd3 | A0A0B2USR8 | A0A0B2VDY5 | Uncharacterized protein. | LysM and putative peptidoglycan-binding domain-containing protein 3. | 0.594 |
ZK632.7 | Lysmd3 | A0A0B2VNA6 | A0A0B2VDY5 | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] | LysM and putative peptidoglycan-binding domain-containing protein 3. | 0.451 |
lysmd1 | Lysmd3 | A0A0B2V194 | A0A0B2VDY5 | LysM and putative peptidoglycan-binding domain-containing protein 1. | LysM and putative peptidoglycan-binding domain-containing protein 3. | 0.596 |