Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
M28.5 | PRPF3 | A0A0B2W185 | A0A0B2VXN7 | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | U4/U6 small nuclear ribonucleoprotein Prp3. | 0.999 |
M28.5 | PRPF4 | A0A0B2W185 | A0A0B2VR26 | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | U4/U6 small nuclear ribonucleoprotein Prp4. | 0.998 |
M28.5 | Tcan_10180 | A0A0B2W185 | A0A0B2V261 | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | Uncharacterized protein. | 0.894 |
M28.5 | Tcan_10191 | A0A0B2W185 | A0A0B2UX32 | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | Uncharacterized protein. | 0.894 |
M28.5 | Wbp4 | A0A0B2W185 | A0A0B2VXI2 | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | WW domain-binding protein 4. | 0.795 |
M28.5 | cyn-11 | A0A0B2W185 | A0A0B2VEK0 | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.996 |
M28.5 | prpf31 | A0A0B2W185 | A0A0B2VU96 | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | U4/U6 small nuclear ribonucleoprotein Prp31. | 0.999 |
M28.5 | snr-3 | A0A0B2W185 | A0A0B2UNK8 | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.984 |
Nup62 | cyn-11 | A0A0B2VTK8 | A0A0B2VEK0 | Nuclear pore glycoprotein p62. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.953 |
PRPF3 | M28.5 | A0A0B2VXN7 | A0A0B2W185 | U4/U6 small nuclear ribonucleoprotein Prp3. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.999 |
PRPF3 | PRPF4 | A0A0B2VXN7 | A0A0B2VR26 | U4/U6 small nuclear ribonucleoprotein Prp3. | U4/U6 small nuclear ribonucleoprotein Prp4. | 0.999 |
PRPF3 | Wbp4 | A0A0B2VXN7 | A0A0B2VXI2 | U4/U6 small nuclear ribonucleoprotein Prp3. | WW domain-binding protein 4. | 0.871 |
PRPF3 | cyn-11 | A0A0B2VXN7 | A0A0B2VEK0 | U4/U6 small nuclear ribonucleoprotein Prp3. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.998 |
PRPF3 | nhp2l1 | A0A0B2VXN7 | A0A0B2V0D4 | U4/U6 small nuclear ribonucleoprotein Prp3. | NHP2-like protein 1. | 0.894 |
PRPF3 | prpf31 | A0A0B2VXN7 | A0A0B2VU96 | U4/U6 small nuclear ribonucleoprotein Prp3. | U4/U6 small nuclear ribonucleoprotein Prp31. | 0.999 |
PRPF3 | snr-3 | A0A0B2VXN7 | A0A0B2UNK8 | U4/U6 small nuclear ribonucleoprotein Prp3. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.989 |
PRPF4 | M28.5 | A0A0B2VR26 | A0A0B2W185 | U4/U6 small nuclear ribonucleoprotein Prp4. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.998 |
PRPF4 | PRPF3 | A0A0B2VR26 | A0A0B2VXN7 | U4/U6 small nuclear ribonucleoprotein Prp4. | U4/U6 small nuclear ribonucleoprotein Prp3. | 0.999 |
PRPF4 | Tcan_10180 | A0A0B2VR26 | A0A0B2V261 | U4/U6 small nuclear ribonucleoprotein Prp4. | Uncharacterized protein. | 0.976 |
PRPF4 | Tcan_10191 | A0A0B2VR26 | A0A0B2UX32 | U4/U6 small nuclear ribonucleoprotein Prp4. | Uncharacterized protein. | 0.976 |
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