Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cdc6 | Cdt1 | A0A0B2VJY4 | A0A0B2VFP1 | Cell division control protein 6-like protein. | DNA replication factor Cdt1. | 0.995 |
Cdc6 | Orc1 | A0A0B2VJY4 | A0A0B2US45 | Cell division control protein 6-like protein. | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | 0.999 |
Cdc6 | mcm-5 | A0A0B2VJY4 | A0A0B2UT61 | Cell division control protein 6-like protein. | DNA helicase; Belongs to the MCM family. | 0.999 |
Cdc6 | mcm-6 | A0A0B2VJY4 | A0A0B2VZH5 | Cell division control protein 6-like protein. | DNA replication licensing factor mcm-6. | 0.997 |
Cdc6 | mcm-6-2 | A0A0B2VJY4 | A0A0B2VZJ9 | Cell division control protein 6-like protein. | DNA replication licensing factor mcm-6; Belongs to the MCM family. | 0.997 |
Cdc6 | mcm10 | A0A0B2VJY4 | A0A0B2VRN1 | Cell division control protein 6-like protein. | Protein MCM10-like protein. | 0.994 |
Cdc6 | mcm2 | A0A0B2VJY4 | A0A0B2VGZ2 | Cell division control protein 6-like protein. | DNA helicase; Belongs to the MCM family. | 0.999 |
Cdc6 | mcm4-a | A0A0B2VJY4 | A0A0B2VZ58 | Cell division control protein 6-like protein. | DNA helicase; Belongs to the MCM family. | 0.999 |
Cdc6 | mcm7 | A0A0B2VJY4 | A0A0B2W1R8 | Cell division control protein 6-like protein. | DNA helicase; Belongs to the MCM family. | 0.999 |
Cdc6 | mmcm3 | A0A0B2VJY4 | A0A0B2V6N7 | Cell division control protein 6-like protein. | DNA helicase; Belongs to the MCM family. | 0.999 |
Cdt1 | Cdc6 | A0A0B2VFP1 | A0A0B2VJY4 | DNA replication factor Cdt1. | Cell division control protein 6-like protein. | 0.995 |
Cdt1 | Orc1 | A0A0B2VFP1 | A0A0B2US45 | DNA replication factor Cdt1. | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | 0.998 |
Cdt1 | mcm-5 | A0A0B2VFP1 | A0A0B2UT61 | DNA replication factor Cdt1. | DNA helicase; Belongs to the MCM family. | 0.997 |
Cdt1 | mcm-6 | A0A0B2VFP1 | A0A0B2VZH5 | DNA replication factor Cdt1. | DNA replication licensing factor mcm-6. | 0.990 |
Cdt1 | mcm-6-2 | A0A0B2VFP1 | A0A0B2VZJ9 | DNA replication factor Cdt1. | DNA replication licensing factor mcm-6; Belongs to the MCM family. | 0.990 |
Cdt1 | mcm10 | A0A0B2VFP1 | A0A0B2VRN1 | DNA replication factor Cdt1. | Protein MCM10-like protein. | 0.982 |
Cdt1 | mcm2 | A0A0B2VFP1 | A0A0B2VGZ2 | DNA replication factor Cdt1. | DNA helicase; Belongs to the MCM family. | 0.997 |
Cdt1 | mcm4-a | A0A0B2VFP1 | A0A0B2VZ58 | DNA replication factor Cdt1. | DNA helicase; Belongs to the MCM family. | 0.997 |
Cdt1 | mcm7 | A0A0B2VFP1 | A0A0B2W1R8 | DNA replication factor Cdt1. | DNA helicase; Belongs to the MCM family. | 0.997 |
Cdt1 | mmcm3 | A0A0B2VFP1 | A0A0B2V6N7 | DNA replication factor Cdt1. | DNA helicase; Belongs to the MCM family. | 0.996 |
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