STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl-1839S ribosomal protein L18, mitochondrial. (209 aa)    
Predicted Functional Partners:
MRPL40
39S ribosomal protein L40, mitochondrial.
   
   0.979
MRPL4
39S ribosomal protein L4, mitochondrial.
   
   0.976
MRPL38
39S ribosomal protein L38, mitochondrial.
   
 
 0.969
Mrpl20
39S ribosomal protein L20, mitochondrial.
   
   0.967
MRPL17
39S ribosomal protein L17, mitochondrial.
   
   0.965
MRPS30
28S ribosomal protein S30, mitochondrial.
   
   0.964
mrpl-32
Putative 39S ribosomal protein L32, mitochondrial.
   
   0.963
mrpl-19
Putative 39S ribosomal protein L19, mitochondrial.
   
   0.962
Mrpl47
39S ribosomal protein L47, mitochondrial.
   
   0.961
mRpL39
39S ribosomal protein L39, mitochondrial.
   
   0.961
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.