STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcan_18029Reverse transcriptase domain-containing protein. (321 aa)    
Predicted Functional Partners:
FANCM
Fanconi anemia group M protein.
    
 0.883
Tcan_13735
Uncharacterized protein.
    
 0.627
DUT
Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial.
    
 0.619
lin-9
Protein lin-9.
    
 0.618
rbbp7
Histone-binding protein RBBP7.
    
 0.613
lin-54
Protein lin-54.
    
 0.603
sur-2
Mediator of RNA polymerase II transcription subunit 23.
    
  0.582
mdt-17
Mediator of RNA polymerase II transcription subunit 17.
    
 0.581
sas-6
Spindle assembly abnormal protein 6.
    
 0.574
Rpa2
Replication protein A 32 kDa subunit.
    
 0.574
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.