STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC23AProtein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (557 aa)    
Predicted Functional Partners:
SEC24C
Protein transport protein Sec24C.
   
 0.998
Sec13
Protein SEC13-like protein; Belongs to the WD repeat SEC13 family.
   
 0.997
sec31a
Protein transport protein Sec31A.
   
 0.995
ZK180.4
GTP-binding protein SAR1; Belongs to the small GTPase superfamily. SAR1 family.
    
 0.988
ZK512.5
Protein transport protein sec16.
   
 0.985
SEC24B
Protein transport protein Sec24B.
   
 0.979
SEC24B-3
Protein transport protein Sec24B.
   
 0.979
Tcan_15024
Uncharacterized protein.
   
 0.973
ASZ1
Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1.
   
 0.973
SEC24B-2
Protein transport protein Sec24B.
   
 0.968
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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