STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcan_12411UPF0609 protein C4orf27. (390 aa)    
Predicted Functional Partners:
pme-1
Poly [ADP-ribose] polymerase.
    
 
 0.758
Parp2
Poly [ADP-ribose] polymerase.
    
 
 0.758
pme-5
Poly [ADP-ribose] polymerase.
    
 
 0.584
pme-5-2
Poly(ADP-ribose) polymerase pme-5.
    
 
 0.584
pme-5-3
Poly [ADP-ribose] polymerase.
    
 
 0.584
Tcan_02345
Histone H2A; Belongs to the histone H2A family.
    
 
 0.445
Tcan_07749
Histone H2A; Belongs to the histone H2A family.
    
 
 0.445
Tcan_12698
Histone H2A; Belongs to the histone H2A family.
    
 
 0.445
Tcan_02260
Histone H2A; Belongs to the histone H2A family.
    
 
 0.445
Tcan_09033
Histone H2A; Belongs to the histone H2A family.
    
 
 0.445
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.