STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTase-6Putative RNA-directed DNA polymerase from transposon BS. (295 aa)    
Predicted Functional Partners:
rpl-10
60S ribosomal protein L10.
   
 0.612
MRPL16
39S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family.
   
 0.612
rpl-10-2
60S ribosomal protein L10.
   
 0.612
Hspbp1
Hsp70-binding protein 1.
   
 0.612
Tcan_00472
Reverse transcriptase domain-containing protein.
  
     0.481
X-element-12
Putative RNA-directed DNA polymerase from transposon X-element.
  
     0.479
X-element-14
Putative RNA-directed DNA polymerase from transposon X-element.
  
     0.475
Tcan_01521
Uncharacterized protein.
  
     0.472
X-element-16
Putative RNA-directed DNA polymerase from transposon X-element.
  
     0.468
rpl-8
60S ribosomal protein L8.
   
 
 0.442
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
Server load: low (28%) [HD]