STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDB1DNA damage-binding protein 1. (1230 aa)    
Predicted Functional Partners:
leo1
RNA polymerase-associated protein LEO1.
    
 
 0.999
ERCC8
DNA excision repair protein ERCC-8.
    
 0.998
Dtl
Denticleless-like protein.
    
 0.997
Roc1a
RING-box protein 1A.
    
 0.997
Cul4b
Cullin-4B; Belongs to the cullin family.
   
 0.996
Tcan_02198
DDB1-and CUL4-associated factor-like 1.
    
 0.990
Vprbp
Protein VPRBP.
    
 0.990
Dcaf5
DDB1-and CUL4-associated factor 5.
    
 0.988
CUL4A
Cullin-4A; Belongs to the cullin family.
   
 0.987
CRBN-2
Protein cereblon.
    
 
 0.987
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.