ddx20 protein (Toxocara canis) - STRING interaction network

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Score

ddx20

Putative ATP-dependent RNA helicase DDX20. (935 aa)

Predicted Functional Partners:

SMN1

0.994

Nup62

0.950

gemin2

0.936

NUP214

0.891

Lsm10

0.871

LSM1

0.856

Edc3

0.851

snr-3

0.849

WDR7

0.838

Tcan_18335

0.838

Your Current Organism:

Toxocara canis

NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Edc3	LSM1	A0A0B2W5V4	A0A0B2V8J1	Enhancer of mRNA-decapping protein 3.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.910
Edc3	ddx20	A0A0B2W5V4	A0A0B2VTK4	Enhancer of mRNA-decapping protein 3.	Putative ATP-dependent RNA helicase DDX20.	0.851
LSM1	Edc3	A0A0B2V8J1	A0A0B2W5V4	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	Enhancer of mRNA-decapping protein 3.	0.910
LSM1	Lsm10	A0A0B2V8J1	A0A0B2V5L8	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	U7 snRNA-associated Sm-like protein LSm10.	0.645
LSM1	ddx20	A0A0B2V8J1	A0A0B2VTK4	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	Putative ATP-dependent RNA helicase DDX20.	0.856
LSM1	snr-3	A0A0B2V8J1	A0A0B2UNK8	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.738
Lsm10	LSM1	A0A0B2V5L8	A0A0B2V8J1	U7 snRNA-associated Sm-like protein LSm10.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.645
Lsm10	SMN1	A0A0B2V5L8	A0A0B2W204	U7 snRNA-associated Sm-like protein LSm10.	Survival of motor neuron protein.	0.974
Lsm10	Tcan_18335	A0A0B2V5L8	A0A0B2V1X6	U7 snRNA-associated Sm-like protein LSm10.	Putative WD repeat-containing protein.	0.662
Lsm10	WDR7	A0A0B2V5L8	A0A0B2URZ1	U7 snRNA-associated Sm-like protein LSm10.	WD repeat-containing protein 7.	0.662
Lsm10	ddx20	A0A0B2V5L8	A0A0B2VTK4	U7 snRNA-associated Sm-like protein LSm10.	Putative ATP-dependent RNA helicase DDX20.	0.871
Lsm10	gemin2	A0A0B2V5L8	A0A0B2VLK7	U7 snRNA-associated Sm-like protein LSm10.	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	0.789
Lsm10	snr-3	A0A0B2V5L8	A0A0B2UNK8	U7 snRNA-associated Sm-like protein LSm10.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.603
NUP214	Nup62	A0A0B2UZ00	A0A0B2VTK8	Nuclear pore complex protein.	Nuclear pore glycoprotein p62.	0.999
NUP214	ddx20	A0A0B2UZ00	A0A0B2VTK4	Nuclear pore complex protein.	Putative ATP-dependent RNA helicase DDX20.	0.891
Nup62	NUP214	A0A0B2VTK8	A0A0B2UZ00	Nuclear pore glycoprotein p62.	Nuclear pore complex protein.	0.999
Nup62	SMN1	A0A0B2VTK8	A0A0B2W204	Nuclear pore glycoprotein p62.	Survival of motor neuron protein.	0.923
Nup62	Tcan_18335	A0A0B2VTK8	A0A0B2V1X6	Nuclear pore glycoprotein p62.	Putative WD repeat-containing protein.	0.709
Nup62	WDR7	A0A0B2VTK8	A0A0B2URZ1	Nuclear pore glycoprotein p62.	WD repeat-containing protein 7.	0.709
Nup62	ddx20	A0A0B2VTK8	A0A0B2VTK4	Nuclear pore glycoprotein p62.	Putative ATP-dependent RNA helicase DDX20.	0.950