STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tatdn3Putative deoxyribonuclease TATDN3. (294 aa)    
Predicted Functional Partners:
mblac1
Metallo-beta-lactamase domain-containing protein 1.
      
 0.601
RPS6KC1
Ribosomal protein S6 kinase delta-1.
      
 0.595
DZIP3
E3 ubiquitin-protein ligase DZIP3.
      
 0.593
LOXHD1
Lipoxygenase homology domain-containing protein 1.
      
 0.575
R53.2
Putative thymidylate kinase.
     
 0.522
Sec61a2
Protein transport protein Sec61 subunit alpha isoform 2.
     
 0.507
Srp54
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
     
 0.496
tpi-1
Triosephosphate isomerase.
     
 0.488
mtss-1
Single-stranded DNA-binding protein, mitochondrial.
  
  
 0.479
INPS1
Inositol-3-phosphate synthase.
      
 0.451
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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