STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rbm28RNA-binding protein 28. (621 aa)    
Predicted Functional Partners:
Tcan_12484
Putative RNA-binding protein.
   
 
 0.996
RRP12
RRP12-like protein.
   
 
 0.993
puf-12
Pumilio domain-containing protein 12.
   
 
 0.992
RBM34
RNA-binding protein 34.
   
 
 0.991
DDX24
ATP-dependent RNA helicase DDX24.
   
 
 0.991
T07A9.9
Putative nucleolar GTP-binding protein 1.
   
 
 0.990
Ppan
Suppressor of SWI4 1-like protein.
   
   0.989
Tcan_14639
Ribosomal L1 domain-containing protein.
   
 
 0.988
Tcan_03949
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 
 0.985
C18A3.3
Putative rRNA-processing protein EBP2-like protein.
   
 
 0.984
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.