STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcan_10048Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatC family. (380 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.759
C18E9.6
Mitochondrial import receptor subunit TOM40-like protein.
   
 0.613
rpn-11
26S proteasome non-ATPase regulatory subunit 14.
    
 0.598
rpn-11-2
26S proteasome non-ATPase regulatory subunit 14.
    
 0.598
RpS27A
Ubiquitin-40S ribosomal protein S27a.
    
  0.596
rpl-21
60S ribosomal protein L21.
   
   0.583
mre-11
Double-strand break repair protein mre-11; Belongs to the MRE11/RAD32 family.
    
 0.578
MRPL2
39S ribosomal protein L2, mitochondrial.
   
 
 0.562
ctb-1
Cytochrome b.
    
 0.556
LYRM4
LYR motif-containing protein 4; Belongs to the complex I LYR family.
    
 0.556
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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