STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZSWIM8Zinc finger SWIM domain-containing protein 8. (2141 aa)    
Predicted Functional Partners:
Tceb1
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
 0.769
TCEB2
Transcription elongation factor B polypeptide 2.
    
 0.754
cul-2
Cullin-2; Belongs to the cullin family.
     
 0.742
Roc1a
RING-box protein 1A.
     
 0.646
RNF7
RING-box protein 2.
     
 0.497
bms1
Ribosome biogenesis protein bms1.
      
 0.418
ina-1
Integrin alpha ina-1; Belongs to the integrin alpha chain family.
      
 0.416
abhd11
Alpha/beta hydrolase domain-containing protein 11.
      
 0.416
pat-2
Integrin alpha pat-2; Belongs to the integrin alpha chain family.
      
 0.416
Taf9b
Transcription initiation factor TFIID subunit 9B.
      
 0.414
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.