STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abcb8ATP-binding cassette sub-family B member 8, mitochondrial. (690 aa)    
Predicted Functional Partners:
Abcb7
ATP-binding cassette sub-family B member 7, mitochondrial.
    
0.720
crt-1
Calreticulin.
   
 0.700
crt-1-2
Calreticulin.
   
 0.700
irk-1
Inward rectifier potassium channel irk-1.
   
 0.689
KCNJ2
Inward rectifier potassium channel 2.
   
 0.680
hsdl2
Hydroxysteroid dehydrogenase-like protein 2.
  
 0.657
pdi-2
Protein disulfide-isomerase.
  
 0.621
C14B9.2
Protein disulfide-isomerase.
  
 0.621
PDIA3
Protein disulfide-isomerase.
  
 0.621
pdi-2-2
Protein disulfide-isomerase 2.
  
 0.621
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.