Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NFAT5 | pal-1 | A0A0B2V0S3 | A0A0B2W363 | Nuclear factor of activated T-cells 5. | Homeobox protein pal-1. | 0.418 |
Ogg1 | acn-1 | A0A0B2V2U5 | A0A0B2VQ28 | N-glycosylase/DNA lyase. | Angiotensin-converting enzyme. | 0.487 |
Ogg1 | pal-1 | A0A0B2V2U5 | A0A0B2W363 | N-glycosylase/DNA lyase. | Homeobox protein pal-1. | 0.597 |
RUVBL1 | pal-1 | A0A0B2V1B7 | A0A0B2W363 | DNA helicase; Belongs to the RuvB family. | Homeobox protein pal-1. | 0.423 |
T | pal-1 | A0A0B2UVB6 | A0A0B2W363 | Brachyury protein. | Homeobox protein pal-1. | 0.402 |
T | pha-4 | A0A0B2UVB6 | A0A0B2VMS8 | Brachyury protein. | Defective pharyngeal development protein 4. | 0.600 |
Tcan_05701 | pal-1 | A0A0B2VRF7 | A0A0B2W363 | Uncharacterized protein. | Homeobox protein pal-1. | 0.451 |
acn-1 | Ogg1 | A0A0B2VQ28 | A0A0B2V2U5 | Angiotensin-converting enzyme. | N-glycosylase/DNA lyase. | 0.487 |
acn-1 | pal-1 | A0A0B2VQ28 | A0A0B2W363 | Angiotensin-converting enzyme. | Homeobox protein pal-1. | 0.451 |
mex3b | pal-1 | A0A0B2V6L3 | A0A0B2W363 | RNA-binding protein MEX3B. | Homeobox protein pal-1. | 0.551 |
pal-1 | NFAT5 | A0A0B2W363 | A0A0B2V0S3 | Homeobox protein pal-1. | Nuclear factor of activated T-cells 5. | 0.418 |
pal-1 | Ogg1 | A0A0B2W363 | A0A0B2V2U5 | Homeobox protein pal-1. | N-glycosylase/DNA lyase. | 0.597 |
pal-1 | RUVBL1 | A0A0B2W363 | A0A0B2V1B7 | Homeobox protein pal-1. | DNA helicase; Belongs to the RuvB family. | 0.423 |
pal-1 | T | A0A0B2W363 | A0A0B2UVB6 | Homeobox protein pal-1. | Brachyury protein. | 0.402 |
pal-1 | Tcan_05701 | A0A0B2W363 | A0A0B2VRF7 | Homeobox protein pal-1. | Uncharacterized protein. | 0.451 |
pal-1 | acn-1 | A0A0B2W363 | A0A0B2VQ28 | Homeobox protein pal-1. | Angiotensin-converting enzyme. | 0.451 |
pal-1 | mex3b | A0A0B2W363 | A0A0B2V6L3 | Homeobox protein pal-1. | RNA-binding protein MEX3B. | 0.551 |
pal-1 | pha-4 | A0A0B2W363 | A0A0B2VMS8 | Homeobox protein pal-1. | Defective pharyngeal development protein 4. | 0.403 |
pal-1 | tbx-8 | A0A0B2W363 | A0A0B2VKE9 | Homeobox protein pal-1. | T-box transcription factor tbx-8. | 0.402 |
pha-4 | T | A0A0B2VMS8 | A0A0B2UVB6 | Defective pharyngeal development protein 4. | Brachyury protein. | 0.600 |
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