STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcan_16448Oocyte zinc finger protein XlCOF7.1. (367 aa)    
Predicted Functional Partners:
unc-89-3
Muscle M-line assembly protein unc-89.
   
 0.823
unc-89-4
Muscle M-line assembly protein unc-89.
   
 0.823
unc-89-5
Muscle M-line assembly protein unc-89.
   
 0.823
mrps-16
Putative 28S ribosomal protein S16, mitochondrial.
   
 0.766
GART
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
     
 0.754
Polr3c
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.732
RUVBL1
DNA helicase; Belongs to the RuvB family.
   
 0.679
GTF3C3
General transcription factor 3C polypeptide 3.
    
 0.676
nme6
Nucleoside diphosphate kinase 6.
    
 0.644
Tcan_16840
Uncharacterized protein.
    
 0.644
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.