STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX72977.1Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 0.0027 serine/threonine protein kinase with TPR repeats K00908; Psort location: Cytoplasmic, score: 8.96. (457 aa)    
Predicted Functional Partners:
ribB
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.901
glnS
glutamine--tRNA ligase; KEGG: bfs:BF2773 3.0e-242 glnS; glutaminyl-tRNA synthetase K01886; Psort location: Cytoplasmic, score: 9.97.
  
    0.775
EEX71930.1
Tetratricopeptide repeat protein; KEGG: reh:H16_A0376 2.5e-06 O-linked N-acetylglucosamine transferase OGT; Psort location: Cytoplasmic, score: 8.96.
  
 0.773
EEX72618.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: eci:UTI89_C0501 7.8e-61 htpG; chaperone HSP90, heat shock protein C 62.5 K04079; Psort location: Cytoplasmic, score: 9.26.
  
 0.766
EEX71849.1
Glycosyltransferase, group 2 family protein; KEGG: tth:TTC0526 3.0e-12 glycosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.750
recQ
KEGG: bfr:BF4076 1.1e-299 recQ; ATP-dependent DNA helicase RecQ K03654; Psort location: Cytoplasmic, score: 8.96.
   
   0.708
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  0.706
EEX72978.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.705
EEX72979.1
Hypothetical protein.
       0.705
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.699
Your Current Organism:
Alloprevotella tannerae
NCBI taxonomy Id: 626522
Other names: A. tannerae ATCC 51259, Alloprevotella tannerae ATCC 51259, Prevotella tannerae ATCC 51259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.