STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX72530.1Transcriptional regulator, LuxR family; Psort location: CytoplasmicMembrane, score: 10.00. (313 aa)    
Predicted Functional Partners:
EEX72618.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: eci:UTI89_C0501 7.8e-61 htpG; chaperone HSP90, heat shock protein C 62.5 K04079; Psort location: Cytoplasmic, score: 9.26.
   
  0.650
alaS
alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
  0.635
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
  0.623
EEX71849.1
Glycosyltransferase, group 2 family protein; KEGG: tth:TTC0526 3.0e-12 glycosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.605
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  0.580
EEX71930.1
Tetratricopeptide repeat protein; KEGG: reh:H16_A0376 2.5e-06 O-linked N-acetylglucosamine transferase OGT; Psort location: Cytoplasmic, score: 8.96.
  
 0.573
EEX71619.1
Hypothetical protein.
    
  0.543
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  0.536
EEX70368.1
Ankyrin repeat protein; KEGG: ptr:469607 7.3e-08 LOC469607.
   
  0.507
EEX70369.1
Ankyrin repeat protein; KEGG: hsa:6041 0.00034 RNASEL, RNS4; ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent).
   
  0.507
Your Current Organism:
Alloprevotella tannerae
NCBI taxonomy Id: 626522
Other names: A. tannerae ATCC 51259, Alloprevotella tannerae ATCC 51259, Prevotella tannerae ATCC 51259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.