STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX72228.1RecF/RecN/SMC N-terminal domain protein; KEGG: eca:ECA3094 2.5e-06 ABC transporter ATP-binding protein K02013; Psort location: Cytoplasmic, score: 8.96. (279 aa)    
Predicted Functional Partners:
EEX72229.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
      0.878
EEX70650.1
Hypothetical protein; KEGG: chu:CHU_3268 6.4e-23 peptidyl-prolyl cis-trans isomerase K01802.
  
     0.757
EEX71221.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
     0.741
EEX72371.1
PAP2 family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.699
EEX71213.1
Phosphate-selective porin O and P; Psort location: OuterMembrane, score: 9.49.
  
     0.698
EEX71081.1
Cyclic nucleotide-binding domain protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.689
EEX71600.1
Hypothetical protein; KEGG: rru:Rru_A1969 0.0045 esterase, PHB depolymerase.
  
     0.682
EEX72613.1
Hypothetical protein; KEGG: ava:Ava_3999 3.7e-08 phytase K01083.
  
     0.655
EEX71790.1
Hypothetical protein; KEGG: ret:RHE_CH03849 0.0064 hypothetical protein K01076.
 
     0.638
EEX72226.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
 
     0.630
Your Current Organism:
Alloprevotella tannerae
NCBI taxonomy Id: 626522
Other names: A. tannerae ATCC 51259, Alloprevotella tannerae ATCC 51259, Prevotella tannerae ATCC 51259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.