Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEX71203.1 | EEX72384.1 | GCWU000325_01945 | GCWU000325_00847 | Psort location: OuterMembrane, score: 10.00. | Peptidase, M48 family; KEGG: bfr:BF1400 5.3e-55 peptidase K07387. | 0.435 |
EEX71203.1 | EEX72704.1 | GCWU000325_01945 | GCWU000325_00365 | Psort location: OuterMembrane, score: 10.00. | TonB-dependent receptor; KEGG: shn:Shewana3_3063 4.3e-09 phosphatidylglycerophosphatase K01094; Psort location: OuterMembrane, score: 9.92. | 0.435 |
EEX71932.1 | EEX72384.1 | GCWU000325_01475 | GCWU000325_00847 | Peptidase, M23 family; KEGG: eci:UTI89_C0735 3.9e-18 tolA; membrane spanning protein TolA K03646; Psort location: CytoplasmicMembrane, score: 8.02. | Peptidase, M48 family; KEGG: bfr:BF1400 5.3e-55 peptidase K07387. | 0.495 |
EEX72384.1 | EEX71203.1 | GCWU000325_00847 | GCWU000325_01945 | Peptidase, M48 family; KEGG: bfr:BF1400 5.3e-55 peptidase K07387. | Psort location: OuterMembrane, score: 10.00. | 0.435 |
EEX72384.1 | EEX71932.1 | GCWU000325_00847 | GCWU000325_01475 | Peptidase, M48 family; KEGG: bfr:BF1400 5.3e-55 peptidase K07387. | Peptidase, M23 family; KEGG: eci:UTI89_C0735 3.9e-18 tolA; membrane spanning protein TolA K03646; Psort location: CytoplasmicMembrane, score: 8.02. | 0.495 |
EEX72384.1 | EEX72385.1 | GCWU000325_00847 | GCWU000325_00848 | Peptidase, M48 family; KEGG: bfr:BF1400 5.3e-55 peptidase K07387. | Hypothetical protein. | 0.415 |
EEX72384.1 | EEX72386.1 | GCWU000325_00847 | GCWU000325_00849 | Peptidase, M48 family; KEGG: bfr:BF1400 5.3e-55 peptidase K07387. | Hypothetical protein. | 0.415 |
EEX72384.1 | EEX72387.1 | GCWU000325_00847 | GCWU000325_00850 | Peptidase, M48 family; KEGG: bfr:BF1400 5.3e-55 peptidase K07387. | Hypothetical protein. | 0.415 |
EEX72384.1 | EEX72604.1 | GCWU000325_00847 | GCWU000325_00438 | Peptidase, M48 family; KEGG: bfr:BF1400 5.3e-55 peptidase K07387. | DGQHR domain protein; Psort location: Cytoplasmic, score: 8.96. | 0.429 |
EEX72384.1 | EEX72704.1 | GCWU000325_00847 | GCWU000325_00365 | Peptidase, M48 family; KEGG: bfr:BF1400 5.3e-55 peptidase K07387. | TonB-dependent receptor; KEGG: shn:Shewana3_3063 4.3e-09 phosphatidylglycerophosphatase K01094; Psort location: OuterMembrane, score: 9.92. | 0.421 |
EEX72384.1 | ribB | GCWU000325_00847 | GCWU000325_02854 | Peptidase, M48 family; KEGG: bfr:BF1400 5.3e-55 peptidase K07387. | 3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.519 |
EEX72385.1 | EEX72384.1 | GCWU000325_00848 | GCWU000325_00847 | Hypothetical protein. | Peptidase, M48 family; KEGG: bfr:BF1400 5.3e-55 peptidase K07387. | 0.415 |
EEX72385.1 | EEX72386.1 | GCWU000325_00848 | GCWU000325_00849 | Hypothetical protein. | Hypothetical protein. | 0.773 |
EEX72385.1 | EEX72387.1 | GCWU000325_00848 | GCWU000325_00850 | Hypothetical protein. | Hypothetical protein. | 0.773 |
EEX72386.1 | EEX72384.1 | GCWU000325_00849 | GCWU000325_00847 | Hypothetical protein. | Peptidase, M48 family; KEGG: bfr:BF1400 5.3e-55 peptidase K07387. | 0.415 |
EEX72386.1 | EEX72385.1 | GCWU000325_00849 | GCWU000325_00848 | Hypothetical protein. | Hypothetical protein. | 0.773 |
EEX72386.1 | EEX72387.1 | GCWU000325_00849 | GCWU000325_00850 | Hypothetical protein. | Hypothetical protein. | 0.773 |
EEX72387.1 | EEX72384.1 | GCWU000325_00850 | GCWU000325_00847 | Hypothetical protein. | Peptidase, M48 family; KEGG: bfr:BF1400 5.3e-55 peptidase K07387. | 0.415 |
EEX72387.1 | EEX72385.1 | GCWU000325_00850 | GCWU000325_00848 | Hypothetical protein. | Hypothetical protein. | 0.773 |
EEX72387.1 | EEX72386.1 | GCWU000325_00850 | GCWU000325_00849 | Hypothetical protein. | Hypothetical protein. | 0.773 |
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