STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trxAThioredoxin; KEGG: ava:Ava_0187 3.2e-16 thioredoxin K03671; Psort location: Cytoplasmic, score: 9.26. (122 aa)    
Predicted Functional Partners:
EEX71864.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: vpa:VPA0949 1.4e-141 putative NADH oxidase K00359; Psort location: Cytoplasmic, score: 9.26; Belongs to the sulfur carrier protein TusA family.
     
 0.870
trxB
KEGG: bth:BT4336 1.9e-121 thioredoxin reductase (NADPH) K00384; Psort location: Cytoplasmic, score: 9.97.
  
 0.841
EEX71863.1
Transcriptional regulator, MarR family; KEGG: bja:bll2512 0.00068 putative acetyltransferase K03828; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.791
EEX71866.1
Hypothetical protein.
       0.714
nifJ
KEGG: bth:BT1747 0. pyruvate-flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
    
 0.546
gap
Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: bth:BT4263 6.6e-135 glyceraldehyde 3-phosphate dehydrogenase K00134; Psort location: Cytoplasmic, score: 9.97; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.533
groL
Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
   
 
 0.532
ribB
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
 0.530
EEX71867.1
Hypothetical protein.
  
    0.523
EEX70268.1
Hypothetical protein; KEGG: ftu:FTT1425c 8.8e-22 naoX; NADH oxidase K00356; Psort location: Cytoplasmic, score: 8.96.
     
 0.520
Your Current Organism:
Alloprevotella tannerae
NCBI taxonomy Id: 626522
Other names: A. tannerae ATCC 51259, Alloprevotella tannerae ATCC 51259, Prevotella tannerae ATCC 51259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.