Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX71284.1Site-specific recombinase, phage integrase family; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family. (471 aa)    
Predicted Functional Partners:
EEX71285.1
Hypothetical protein.
       0.746
EEX71301.1
RteC protein.
  
     0.666
EEX71322.1
CHC2 zinc finger domain protein; KEGG: spd:SPD_0957 2.3e-08 dnaG; DNA primase.
  
     0.649
EEX72732.1
RteC protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.631
EEX71304.1
Relaxase/mobilization nuclease domain protein.
  
     0.611
nifJ
KEGG: bth:BT1747 0. pyruvate-flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
     
  0.566
EEX71296.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ssn:SSO_2461 2.3e-40 evgS, evgA; putative sensor for regulator EvgA K07679; Psort location: CytoplasmicMembrane, score: 7.88.
  
     0.532
rpsU
Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
  
 
   0.421
traM
Conjugative transposon TraM protein.
  
     0.421
Your Current Organism:
Alloprevotella tannerae
NCBI taxonomy Id: 626522
Other names: A. tannerae ATCC 51259, Alloprevotella tannerae ATCC 51259, Prevotella tannerae ATCC 51259
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