STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX71289.1Hypothetical protein. (116 aa)    
Predicted Functional Partners:
nifJ
KEGG: bth:BT1747 0. pyruvate-flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
     
 0.909
EEX71288.1
DNA binding domain, excisionase family; Psort location: Cytoplasmic, score: 8.96.
       0.824
EEX71290.1
KEGG: ddi:DDB0167703 0.0047 hypothetical protein K01971.
       0.719
EEX71287.1
Hypothetical protein.
       0.598
EEX71291.1
KEGG: bth:BT0105 3.5e-216 DNA topoisomerase I (Omega-protein) K03169.
       0.545
EEX71286.1
DNA binding domain, excisionase family.
       0.505
Your Current Organism:
Alloprevotella tannerae
NCBI taxonomy Id: 626522
Other names: A. tannerae ATCC 51259, Alloprevotella tannerae ATCC 51259, Prevotella tannerae ATCC 51259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.