STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX71025.1LICD family protein; KEGG: lla:L15884 8.5e-32 ycbG; LPS biosynthesis protein K07271; Psort location: Cytoplasmic, score: 8.96. (276 aa)    
Predicted Functional Partners:
EEX71024.1
Glycosyltransferase, group 2 family protein; KEGG: mma:MM0653 6.1e-22 glycosyltransferase involved in cell wall biogenesis.
       0.773
nadB
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
       0.693
EEX71004.1
Hypothetical protein; KEGG: afu:AF1142 8.9e-37 rfbF; glucose-1-phosphate cytidylyltransferase (RfbF) K00978; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.625
EEX70855.1
NAD dependent epimerase/dehydratase family protein; KEGG: dre:192315 4.6e-30 uxs1; UDP-glucuronic acid decarboxylase 1 K08678; Psort location: Cytoplasmic, score: 8.96.
 
     0.612
EEX70854.1
Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; KEGG: sag:SAG1417 1.4e-63 nucleotidyl transferase, putative K00991; Belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.
 
   
 0.562
EEX71023.1
Hypothetical protein.
       0.509
EEX71005.1
Putative histidinol-phosphate transaminase; KEGG: msu:MS1574 3.2e-32 hisC; histidinol-phosphate aminotransferase/Tyrosine aminotransferase K00817; Psort location: Cytoplasmic, score: 8.96.
 
     0.418
Your Current Organism:
Alloprevotella tannerae
NCBI taxonomy Id: 626522
Other names: A. tannerae ATCC 51259, Alloprevotella tannerae ATCC 51259, Prevotella tannerae ATCC 51259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.