STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybeYTranslation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (139 aa)    
Predicted Functional Partners:
EEX71484.1
PhoH family protein; KEGG: reh:H16_A0527 6.3e-59 phoH; phosphate starvation-inducible protein PhoH,predicted ATPase; Psort location: Cytoplasmic, score: 9.26.
  
  
 0.935
EEX71995.1
Superoxide dismutase, Mn/Fe family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.866
rpsQ
30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
    
 
 0.783
rplQ
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.779
EEX71949.1
Transporter gate domain protein; Psort location: CytoplasmicMembrane, score: 10.00.
      0.773
EEX72918.1
Rhodanese-like protein; KEGG: reh:H16_A0333 3.9e-11 rhodanese-related sulfurtransferase.
  
   0.765
EEX71864.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: vpa:VPA0949 1.4e-141 putative NADH oxidase K00359; Psort location: Cytoplasmic, score: 9.26; Belongs to the sulfur carrier protein TusA family.
   
   0.763
EEX70268.1
Hypothetical protein; KEGG: ftu:FTT1425c 8.8e-22 naoX; NADH oxidase K00356; Psort location: Cytoplasmic, score: 8.96.
   
   0.763
rplK
Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
    
   0.760
rplU
Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
   
   0.757
Your Current Organism:
Alloprevotella tannerae
NCBI taxonomy Id: 626522
Other names: A. tannerae ATCC 51259, Alloprevotella tannerae ATCC 51259, Prevotella tannerae ATCC 51259
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