STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEP28689.1O-methyltransferase; KEGG: cpe:CPE1772 1.7e-35 probable O-methyltransferase K00599; Psort location: Cytoplasmic, score: 8.87. (214 aa)    
Predicted Functional Partners:
EEP28688.1
Peptidase, U32 family; KEGG: cac:CAC1687 5.1e-112 collagenase family protease K08303; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.937
EEP28687.1
Hypothetical protein; KEGG: lsl:LSL_1142 2.5e-25 6-phosphogluconolactonase K01057.
    
  0.850
rnj
Hypothetical protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
       0.840
EEP28406.1
Peptidase, U32 family; KEGG: mac:MA0538 2.0e-88 peptidase family protein U32 K08303; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.594
EEP28691.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.542
EEP28692.1
RNAse H domain protein, YqgF family; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
       0.535
EEP28693.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87; Belongs to the UPF0297 family.
       0.535
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
  
    0.510
EEP29135.1
RNA methyltransferase, RsmE family; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
   
    0.422
EEP29165.1
Phosphoribulokinase/uridine kinase family protein; KEGG: tma:TM0751 3.7e-118 uridine kinase K00876; Psort location: Cytoplasmic, score: 8.87.
  
    0.419
Your Current Organism:
Shuttleworthia satelles
NCBI taxonomy Id: 626523
Other names: S. satelles DSM 14600, Shuttleworthia satelles DSM 14600, Shuttleworthia satelles VPI D143K-13, Shuttleworthia satelles str. DSM 14600, Shuttleworthia satelles strain DSM 14600
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