STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dapADihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (297 aa)    
Predicted Functional Partners:
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
 
 
 0.994
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737.
  
 
 0.955
asd
KEGG: lsl:LSL_0313 1.9e-153 asd; aspartate-semialdehyde dehydrogenase K00133; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.891
EEP29218.1
KEGG: lla:L0121 2.5e-142 lysA; diaminopimelate decarboxylase K01586; Psort location: Cytoplasmic, score: 8.87.
  
 0.886
EEP27645.1
KEGG: swo:Swol_1319 1.8e-77 homoserine dehydrogenase K00003; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.842
pdxB-2
KEGG: cac:CAC0089 6.5e-73 serA; D-3-phosphoglycerate dehydrogenase K00058; Psort location: Cytoplasmic, score: 9.98; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
  
 0.764
rnj
Hypothetical protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
 
  
 0.750
EEP28479.1
Prephenate dehydratase; KEGG: mxa:MXAN_3221 2.1e-51 pheA; chorismate mutase/prephenate dehydratase K01850; Psort location: Cytoplasmic, score: 9.98.
  
  
 0.642
EEP28550.1
Amino acid kinase family; KEGG: ctc:CTC02356 2.0e-117 aspartate kinase K00928; Psort location: Cytoplasmic, score: 8.87; Belongs to the aspartokinase family.
 
 
 0.637
aroK-2
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
  
  
 0.636
Your Current Organism:
Shuttleworthia satelles
NCBI taxonomy Id: 626523
Other names: S. satelles DSM 14600, Shuttleworthia satelles DSM 14600, Shuttleworthia satelles VPI D143K-13, Shuttleworthia satelles str. DSM 14600, Shuttleworthia satelles strain DSM 14600
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