STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEP29469.1Transcriptional regulator, AraC family; KEGG: baa:BA_4344 3.3e-14 Ada_Zn_binding, metal binding domain of Ada K00567; Psort location: Cytoplasmic, score: 9.98. (279 aa)    
Predicted Functional Partners:
EEP28728.1
KEGG: bcz:BCZK3497 1.9e-09 adaA; transcriptional regulator, AraC family K00567; Psort location: Cytoplasmic, score: 9.98.
 
 0.961
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737.
  
 0.935
EEP28479.1
Prephenate dehydratase; KEGG: mxa:MXAN_3221 2.1e-51 pheA; chorismate mutase/prephenate dehydratase K01850; Psort location: Cytoplasmic, score: 9.98.
  
 
 0.865
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
    
 
 0.833
EEP27525.1
Transcriptional regulator, AraC family; KEGG: bli:BL05281 1.4e-10 adaA; methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family) K00567; Psort location: Cytoplasmic, score: 8.87.
  
   0.810
EEP27792.1
KEGG: bcz:BCZK3497 5.9e-09 adaA; transcriptional regulator, AraC family K00567; Psort location: Cytoplasmic, score: 8.87.
  
   0.809
pyk
Pyruvate kinase; KEGG: tte:TTE1815 1.4e-125 pykF; pyruvate kinase K00873; Psort location: Cytoplasmic, score: 8.87.
    
  0.741
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.739
EEP29468.1
KEGG: msu:MS0539 7.7e-125 alpha-glucosidases, family 31 of glycosyl hydrolases K01187; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.633
EEP28900.1
Hypothetical protein.
  
 0.612
Your Current Organism:
Shuttleworthia satelles
NCBI taxonomy Id: 626523
Other names: S. satelles DSM 14600, Shuttleworthia satelles DSM 14600, Shuttleworthia satelles VPI D143K-13, Shuttleworthia satelles str. DSM 14600, Shuttleworthia satelles strain DSM 14600
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