STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysScysteine--tRNA ligase; KEGG: cno:NT01CX_1093 1.5e-146 cysS; cysteinyl-tRNA synthetase K01882; Psort location: Cytoplasmic, score: 9.98; Belongs to the class-I aminoacyl-tRNA synthetase family. (468 aa)    
Predicted Functional Partners:
EEP28794.1
KEGG: sfu:Sfum_2682 5.9e-67 serine O-acetyltransferase K00640; Psort location: Cytoplasmic, score: 9.98.
 
 
 0.988
EEP28102.1
RNA methyltransferase, TrmH family, group 3; KEGG: bce:BC0112 1.2e-64 23S rRNA methyltransferase K03218; Psort location: Cytoplasmic, score: 8.87; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
 
 
 0.961
mrnC
RNase3 domain protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.
  
  
 0.959
cysK
Cysteine synthase A; KEGG: bth:BT3080 3.6e-104 cysteine synthase A K01738; Psort location: Cytoplasmic, score: 8.87.
  
 0.951
EEP27364.1
KEGG: ctc:CTC01806 8.1e-185 5-methyltetrahydrofolate--homocysteine methyltransferase K00548; Psort location: Cytoplasmic, score: 8.87.
    
  0.876
EEP28101.1
Putative RNA polymerase sigma-H factor; KEGG: reh:H16_B0256 0.0014 fliA; DNA-directed RNA polymerase sigma subunit / flagellum specific K00960; Psort location: Cytoplasmic, score: 8.87; Belongs to the sigma-70 factor family.
  
    0.850
EEP27366.1
Homocysteine S-methyltransferase; KEGG: bcl:ABC1868 1.1e-56 5,10-methylenetetrahydrofolate reductase K00297; Psort location: Cytoplasmic, score: 8.87.
    
  0.838
tpiA-2
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
 
 
  
 0.787
valS
valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
 
  
 0.780
leuS
leucine--tRNA ligase; KEGG: gka:GK2842 5.9e-214 leuS; leucyl-tRNA synthetase K01869; Psort location: Cytoplasmic, score: 9.98; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.776
Your Current Organism:
Shuttleworthia satelles
NCBI taxonomy Id: 626523
Other names: S. satelles DSM 14600, Shuttleworthia satelles DSM 14600, Shuttleworthia satelles VPI D143K-13, Shuttleworthia satelles str. DSM 14600, Shuttleworthia satelles strain DSM 14600
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.