STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEP28164.1Hypothetical protein; KEGG: mmu:227738 1.3e-08 Lrsam1; leucine rich repeat and sterile alpha motif containing 1 K01932. (415 aa)    
Predicted Functional Partners:
scpA
ScpA/B protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.821
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
  0.789
EEP28387.1
Competence/damage-inducible domain protein CinA; Belongs to the CinA family.
    
  0.761
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
   
 
  0.734
EEP29484.1
Tetratricopeptide repeat protein; KEGG: mpe:MYPE6470 5.2e-24 parC; DNA topoisomerase IV subunit A K02621; Psort location: Extracellular, score: 7.62.
 
 
 0.702
EEP27823.1
FHA domain protein; KEGG: tel:tll2410 1.0e-05 adenylate cyclase K01768; Psort location: Cytoplasmic, score: 8.87.
 
 
 
 0.601
EEP28163.1
DHHA2 domain protein; KEGG: ctc:CTC01649 7.8e-109 putative manganese-dependent inorganic pyrophosphatase K01507; Psort location: Cytoplasmic, score: 8.87.
       0.589
EEP27612.1
Hypothetical protein; Probably functions as a manganese efflux pump.
  
     0.535
EEP28162.1
Flavin reductase-like protein; KEGG: bmf:BAB1_1090 1.7e-10 nitrilotriacetate monooxygenase component B K00492; Psort location: Cytoplasmic, score: 8.87.
       0.523
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737.
       0.511
Your Current Organism:
Shuttleworthia satelles
NCBI taxonomy Id: 626523
Other names: S. satelles DSM 14600, Shuttleworthia satelles DSM 14600, Shuttleworthia satelles VPI D143K-13, Shuttleworthia satelles str. DSM 14600, Shuttleworthia satelles strain DSM 14600
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