STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fucOLactaldehyde reductase; KEGG: cpf:CPF_1046 2.3e-139 fucO; lactaldehyde reductase K00048; Psort location: Cytoplasmic, score: 9.98. (388 aa)    
Predicted Functional Partners:
EEP29295.1
Aldehyde dehydrogenase (NAD) family protein; KEGG: rru:Rru_A0914 1.1e-123 aldehyde dehydrogenase K04021; Psort location: Cytoplasmic, score: 8.87.
 0.985
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737.
  
 
 0.980
EEP28514.1
4Fe-4S binding domain protein; KEGG: tma:TM1217 3.6e-71 glutamate synthase (NADPH) small chain K00266; Psort location: Cytoplasmic, score: 9.98.
  
 
 0.767
EEP27482.1
Oxidoreductase, aldo/keto reductase family protein; KEGG: sus:Acid_2860 9.9e-93 aldehyde reductase K00011; Psort location: Cytoplasmic, score: 8.87.
   
 0.752
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
   
 
 0.751
gap
KEGG: fth:FTH_1121 1.0e-122 gapA; glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) K00134; Psort location: Cytoplasmic, score: 9.65.
 
  
 0.659
rhaD
Putative rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde.
  
  
 0.608
EEP28192.1
Hypothetical protein.
       0.554
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.550
rhaA
KEGG: bha:BH1552 8.0e-123 L-rhamnose isomerase K01813; Psort location: Cytoplasmic, score: 8.87.
     
 0.442
Your Current Organism:
Shuttleworthia satelles
NCBI taxonomy Id: 626523
Other names: S. satelles DSM 14600, Shuttleworthia satelles DSM 14600, Shuttleworthia satelles VPI D143K-13, Shuttleworthia satelles str. DSM 14600, Shuttleworthia satelles strain DSM 14600
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