STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEP28397.1Hypothetical protein. (128 aa)    
Predicted Functional Partners:
EEP28396.1
DAK2 domain fusion protein YloV; KEGG: bcz:BCZK3615 1.7e-97 dhaK; possible dihydroxyacetone-related kinase K00863; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.982
EEP28306.1
EDD domain protein, DegV family; Psort location: Cytoplasmic, score: 8.87.
 
    0.598
EEP29161.1
EDD domain protein, DegV family; Psort location: Cytoplasmic, score: 8.87.
 
    0.579
EEP29313.1
EDD domain protein, DegV family; Psort location: Cytoplasmic, score: 8.87.
 
    0.554
EEP28280.1
Helix-turn-helix protein, YlxM/p13 family; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.
 
     0.515
EEP28693.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87; Belongs to the UPF0297 family.
  
    0.514
codY
CodY helix-turn-helix domain protein; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family.
  
     0.461
EEP29234.1
KEGG: cpf:CPF_1988 1.6e-23 thiamine pyrophosphokinase K00949; Psort location: Cytoplasmic, score: 8.87.
 
     0.433
EEP28398.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.410
EEP28399.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.410
Your Current Organism:
Shuttleworthia satelles
NCBI taxonomy Id: 626523
Other names: S. satelles DSM 14600, Shuttleworthia satelles DSM 14600, Shuttleworthia satelles VPI D143K-13, Shuttleworthia satelles str. DSM 14600, Shuttleworthia satelles strain DSM 14600
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.