STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEP28401.1Sporulation protein YtfJ. (146 aa)    
Predicted Functional Partners:
EEP28402.1
Hypothetical protein; KEGG: ehi:13.t00009 0.0013 phosphatidylinositol-4-phosphate 5-kinase, putative K00889; Psort location: CytoplasmicMembrane, score: 7.80.
       0.762
EEP28403.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.762
EEP28407.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.746
EEP28404.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: ace:Acel_0020 2.4e-59 peptidoglycan glycosyltransferase K05364; Psort location: CytoplasmicMembrane, score: 9.82.
 
    0.647
EEP27990.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.593
EEP28405.1
Cell cycle protein, FtsW/RodA/SpoVE family; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
       0.585
EEP28406.1
Peptidase, U32 family; KEGG: mac:MA0538 2.0e-88 peptidase family protein U32 K08303; Psort location: Cytoplasmic, score: 8.87.
       0.584
ruvB
Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
       0.566
mreD
Rod shape-determining protein MreD; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.548
EEP29163.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.542
Your Current Organism:
Shuttleworthia satelles
NCBI taxonomy Id: 626523
Other names: S. satelles DSM 14600, Shuttleworthia satelles DSM 14600, Shuttleworthia satelles VPI D143K-13, Shuttleworthia satelles str. DSM 14600, Shuttleworthia satelles strain DSM 14600
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.