STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEP28514.14Fe-4S binding domain protein; KEGG: tma:TM1217 3.6e-71 glutamate synthase (NADPH) small chain K00266; Psort location: Cytoplasmic, score: 9.98. (927 aa)    
Predicted Functional Partners:
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737.
 
 
 0.998
EEP27781.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: cno:NT01CX_0026 1.1e-94 2,4-dienoyl-CoA reductase, putative; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.980
EEP28772.1
4Fe-4S binding domain protein; KEGG: ctc:CTC02417 4.0e-105 periplasmic [Fe] hydrogenase 1 K00533; Psort location: Cytoplasmic, score: 8.87.
 
 0.979
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
 0.979
pyrD
Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate.
 
 0.975
EEP28999.1
Oxidoreductase NAD-binding domain protein; KEGG: cno:NT01CX_0467 1.2e-96 glutamate synthase, small subunit K00226; Psort location: Cytoplasmic, score: 9.98.
 0.972
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
 
 
 0.967
EEP28663.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
   
 0.966
hypA
Putative hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
     0.960
EEP28086.1
Glu/Leu/Phe/Val dehydrogenase, dimerization domain protein; KEGG: blo:BL0630 1.2e-176 gdhA; NADP-specific glutamate dehydrogenase K00262; Psort location: Cytoplasmic, score: 9.98; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.953
Your Current Organism:
Shuttleworthia satelles
NCBI taxonomy Id: 626523
Other names: S. satelles DSM 14600, Shuttleworthia satelles DSM 14600, Shuttleworthia satelles VPI D143K-13, Shuttleworthia satelles str. DSM 14600, Shuttleworthia satelles strain DSM 14600
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